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Table 1 Genomic localization and functional annotation of the 6 CpG sites shown in Fig. 2a

From: Genome-wide DNA methylation profiling is able to identify prefibrotic PMF cases at risk for progression to myelofibrosis

Chr

Name

Localization

Associated gene

 

Coefficient for LDM

16

cg03983220

OpenSea

None

 

 − 7.431161

10

cg11628316

Island

NM_001008541

Max-interacting protein 1

 − 44.910325

2

cg08880875

N_Shore

NM_138804

Meiosis 1 Associated Protein

 − 11.469252

13

cg21459486

OpenSea

none

 

 − 9.140643

16

cg05972185

OpenSea

NM_001164766

Zinc finger homeobox 3

6.017707

19

cg18376352

Island

NM_004750

Cytokine Receptor-Like Factor 1

12.946803

  1. For the definition and nomenclature of CpG islands, shores, open sea, and shelves, see [49, 50]
  2. LDM Linear discriminant model