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Table 2 Array CpGs with significant methylation differences in GDM cord bloods

From: Epigenetic signatures of gestational diabetes mellitus on cord blood methylation

Array CpG

Gene

Chromosomal locationa

β b data set A

β b data set B

Adjusted p value

cg02943336

CARD11

Chr7: 2,959,067

1.08%

1.33%

0.022

cg11449134

CpG island

Chr19: 51,897,791

−0.63%

−0.63%

0.028

cg26001655

KIAA1530

Chr4: 1,356,770

1.20%

1.25%

0.028

cg11010397

AMPH

Chr7: 38,671,977

−1.37%

−1.81%

0.028

cg22865713

SLC17A4

Chr6: 25,779,897

−2.71%

−3.38%

0.028

cg01993865

DSTN

Chr20: 17,550,690

−0.60%

−0.78%

0.028

cg18906596

ANKFY1

Chr17: 4,151,473

−2.73%

−2.29%

0.028

cg05697697

XPNPEP1

Chr10: 111,683,345

0.66%

0.62%

0.028

cg07431064

CBX7

Chr22: 39,529,217

0.95%

1.12%

0.028

cg03345925

ZC3H3

Chr8: 144,599,347

3.39%

3.83%

0.028

cg06945690

ZNF167

Chr3: 44,621,374

2.09%

2.69%

0.031

cg10576992

SEC24D

Chr4: 119,662,530

−2.73%

−2.83%

0.031

cg26281025

HK3

Chr5: 176,308,046

1.04%

1.38%

0.031

cg08732684

ATF6B

Chr6: 32,095,128

1.79%

2.20%

0.035

cg23376861

ATP5A1

Chr18: 43,678,713

−3.45%

−4.32%

0.035

cg21143899

UCK2

Chr1: 165,866,296

1.42%

1.53%

0.035

cg02683621

North shore

Chr7: 150,100,820

1.15%

1.59%

0.035

cg17921080

Open sea

Chr14: 86,478,932

−1.85%

−2.36%

0.035

cg07689396

PRKAR1B

Chr7: 633,050

1.62%

1.42%

0.035

cg08077807

PRKCH

Chr14: 62,001,072

−2.23%

−2.53%

0.037

cg19143209

CpG island

Chr9: 19,789,287

−2.43%

−2.74%

0.039

cg15737302

North shelf

Chr11: 118,302,063

−1.90%

−1.85%

0.039

cg19169154

MFAP4

Chr17: 19,287,978

1.81%

3.21%

0.039

cg07018980

GAK

Chr4: 895,604

1.04%

1.67%

0.040

cg10288510

CpG island

Chr1: 214,158,727

−1.59%

−0.89%

0.040

cg13153307

SEC16A

Chr9: 139,368,749

1.89%

1.55%

0.040

cg10778517

MAD1L1

Chr7: 2,252,773

0.93%

1.18%

0.040

cg08440349

ATP2C2

Chr16: 84,486,704

1.57%

1.33%

0.040

cg01203331

NOP56; SNORD56, 57, 86

Chr20: 2,636,597

1.12%

1.49%

0.040

cg18502630

PTGDS

Chr9: 139,871,955

1.44%

1.35%

0.040

cg03246914

TUBB1

Chr20: 57,596,113

−3.22%

−3.05%

0.040

cg26706238

ABCG5; ABCG8

Chr2: 44,066,206

1.35%

1.27%

0.040

cg11703745

TMCC2

Chr1: 205,199,293

1.62%

1.87%

0.040

cg19830000

NELL2

Chr12: 45,270,312

−0.50%

−0.48%

0.041

cg01205011

ZNF76

Chr6: 35,262,113

−2.28%

−2.44%

0.041

cg01955962

CpG island

Chr15: 73,089,536

−0.54%

−0.64%

0.041

cg25871543

XAB2

Chr19: 7,686,181

0.91%

1.41%

0.041

cg13984931

North shelf

Chr1: 162,788,667

−2.47%

−2.10%

0.041

cg13706613

INPP5E

Chr9: 139,324,927

1.36%

1.10%

0.041

cg03540894

North shelf

Chr12: 133,611,606

−2.46%

−2.84%

0.044

cg01968402

North shore

Chr6: 137,817,775

0.71%

0.58%

0.044

cg26406256

HERC3; NAP1L5

Chr4: 89,619,393

1.51%

1.83%

0.046

cg04078644

North shelf

Chr3: 155,458,975

−1.36%

−1.69%

0.046

cg08542429

AGPAT1

Chr6: 32,139,120

1.49%

1.42%

0.046

cg04514868

MTA1

Chr14: 105,931,040

0.92%

1.08%

0.046

cg05536286

ST8SIA2

Chr15: 92,972,514

−1.13%

−1.22%

0.046

cg08443019

OVCA2; DPH1

Chr17: 1,946,299

1.59%

1.41%

0.046

cg24119500

BAI3

Chr6: 69,420,780

−1.93%

−1.77%

0.046

cg00273340

CCDC88B

Chr 11: 64,112,444

1.22%

1.45%

0.046

cg00730857

WHSC2

Chr4: 1,994,281

0.89%

0.90%

0.046

cg12841566

MADD

Chr11: 47,296,317

1.29%

0.94%

0.046

cg14088574

VPS52

Chr6: 33,234,976

1.17%

1.34%

0.046

cg25927444

TTC7A

Chr2: 47,236,103

−2.23%

−1.91%

0.046

cg09244071

CUX1

Chr7: 101,768,746

1.00%

1.38%

0.046

cg27509867

Open sea

Chr8: 129,165,585

1.15%

1.42%

0.046

cg26828643

FAM38A

Chr16: 88,802,820

1.46%

1.51%

0.048

cg22606873

PRDM16

Chr1: 3,144,679

−1.27%

−1.21%

0.048

cg16126178

AKT1

Chr14: 105,239,857

1.11%

1.35%

0.048

cg16221240

CpG island

Chr2: 130,970,934

−3.16%

−2.49%

0.049

cg03280063

GAK

Chr4: 893,186

1.22%

1.58%

0.049

cg00063535

TPCN1

Chr12: 113,729,491

1.35%

1.75%

0.049

cg08144943

PPM1M

Chr3: 52,280,702

2.09%

1.91%

0.049

cg17881203

WDR18

Chr19: 990,398

0.82%

1.40%

0.049

cg20935025

NFKBIA

Chr14: 35,874,013

1.94%

2.70%

0.049

cg14597908

GNAS

Chr20: 57,414,960

1.79%

1.35%

0.049

  1. aAccording to the annotation provided by Illumina
  2. bPositive β difference indicates hypermethylation and negative β hypomethylation in the GDM group